Mock Version: 1.4.13
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/R-RInside.spec'], timeout=0nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.o8MGqP:/etc/resolv.conf']shell=Falseuid=1001chrootPath='/var/lib/mock/centos-7-i386/root'gid=135user='mockbuild'env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '}logger=<mockbuild.trace_decorator.getLog object at 0x7feeb16b1050>unshare_net=TrueprintOutput=True)
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '125780b794c945e996a77b09bbca9d51', '-D', '/var/lib/mock/centos-7-i386/root', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.o8MGqP:/etc/resolv.conf', '--setenv=LANG=en_US.UTF-8', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOSTNAME=mock', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=HOME=/builddir', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '-u', 'mockbuild', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/R-RInside.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '} and shell False
BUILDSTDERR: Failed to create directory /var/lib/mock/centos-7-i386/root//sys/fs/selinux: Read-only file system
BUILDSTDERR: Failed to create directory /var/lib/mock/centos-7-i386/root//sys/fs/selinux: Read-only file system
Building target platforms: i686
Building for target i686
Wrote: /builddir/build/SRPMS/R-RInside-0.2.14-7.el7.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/R-RInside.spec'], timeout=0nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.o8MGqP:/etc/resolv.conf']shell=Falseuid=1001chrootPath='/var/lib/mock/centos-7-i386/root'gid=135user='mockbuild'env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '}logger=<mockbuild.trace_decorator.getLog object at 0x7feeb16b1050>unshare_net=TrueprintOutput=True)
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'f6fe5afcd3694fffa183fcbda9717e3d', '-D', '/var/lib/mock/centos-7-i386/root', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.o8MGqP:/etc/resolv.conf', '--setenv=LANG=en_US.UTF-8', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOSTNAME=mock', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=HOME=/builddir', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '-u', 'mockbuild', 'bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/R-RInside.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '} and shell False
BUILDSTDERR: Failed to create directory /var/lib/mock/centos-7-i386/root//sys/fs/selinux: Read-only file system
BUILDSTDERR: Failed to create directory /var/lib/mock/centos-7-i386/root//sys/fs/selinux: Read-only file system
Building target platforms: i686
Building for target i686
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.APyMZN
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf R-RInside-0.2.14
+ /usr/bin/mkdir -p R-RInside-0.2.14
+ cd R-RInside-0.2.14
+ /usr/bin/gzip -dc /builddir/build/SOURCES/RInside_0.2.14.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (R-RInside-LdFlags.patch):'
Patch #0 (R-RInside-LdFlags.patch):
+ /usr/bin/cat /builddir/build/SOURCES/R-RInside-LdFlags.patch
+ /usr/bin/patch -p0 --fuzz=0
patching file RInside/R/RInsidePaths.R
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.7QynEO
+ umask 022
+ cd /builddir/build/BUILD
+ cd R-RInside-0.2.14
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.9DzJjP
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386
+ cd R-RInside-0.2.14
+ mkdir -p /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library RInside
BUILDSTDERR: * installing *source* package 'RInside' ...
file 'R/RInsidePaths.R' has the wrong MD5 checksum
BUILDSTDERR: ** libs
/usr/lib/R/bin/Rscript tools/RInsideAutoloads.r > RInsideAutoloads.h
/usr/lib/R/bin/Rscript tools/RInsideEnvVars.r   > RInsideEnvVars.h
g++ -m32  -I"/usr/include/R" -DNDEBUG -I. -I../inst/include/ -I"/usr/lib/R/library/Rcpp/include" -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m32 -march=x86-64 -mtune=generic -mfpmath=sse -fasynchronous-unwind-tables  -c MemBuf.cpp -o MemBuf.o
g++ -m32  -I"/usr/include/R" -DNDEBUG -I. -I../inst/include/ -I"/usr/lib/R/library/Rcpp/include" -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m32 -march=x86-64 -mtune=generic -mfpmath=sse -fasynchronous-unwind-tables  -c RInside.cpp -o RInside.o
g++ -m32 -shared -L/usr/lib/R/lib -Wl,-z,relro -o RInside.so MemBuf.o RInside.o -L/usr/lib/R/lib -lR
g++ -m32  -o libRInside.so MemBuf.o RInside.o -shared -Wl,-z,relro    -L"/usr/lib/R/lib" -lR
ar qc libRInside.a MemBuf.o RInside.o
cp libRInside.so ../inst/lib
cp libRInside.a ../inst/lib
rm libRInside.so libRInside.a
BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/RInside/libs
BUILDSTDERR: ** R
BUILDSTDERR: ** inst
BUILDSTDERR: ** byte-compile and prepare package for lazy loading
BUILDSTDERR: ** help
BUILDSTDERR: *** installing help indices
  converting help for package 'RInside'
BUILDSTDERR:     finding HTML links ... done
    RInside-package                         html  
BUILDSTDERR: ** building package indices
BUILDSTDERR: ** testing if installed package can be loaded
BUILDSTDERR: * DONE (RInside)
+ test -d RInside/src
+ cd RInside/src
+ rm -f MemBuf.o RInside.o RInside.so
+ rm -rf /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/R.css
+ rm -rf RInside/inst/lib
+ rm /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/RInside/lib/libRInside.a
+ mv /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/RInside/lib/libRInside.so /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib
+ rmdir /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/RInside/lib
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/R-RInside-0.2.14
extracting debug info from /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/R/library/RInside/libs/RInside.so
extracting debug info from /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386/usr/lib/libRInside.so
BUILDSTDERR: *** WARNING: identical binaries are copied, not linked:
BUILDSTDERR:         /usr/lib/libRInside.so
BUILDSTDERR:    and  /usr/lib/R/library/RInside/libs/RInside.so
/usr/lib/rpm/sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
BUILDSTDERR: 96 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.8MY10c
+ umask 022
+ cd /builddir/build/BUILD
+ cd R-RInside-0.2.14
+ /usr/bin/R CMD check RInside
* using log directory '/builddir/build/BUILD/R-RInside-0.2.14/RInside.Rcheck'
* using R version 3.5.1 (2018-07-02)
* using platform: i386-redhat-linux-gnu (32-bit)
* using session charset: ASCII
* checking for file 'RInside/DESCRIPTION' ... OK
* this is package 'RInside' version '0.2.14'
* checking package namespace information ... OK
BUILDSTDERR: * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
BUILDSTDERR:   cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.7/bioc/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.7/bioc/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.7/data/annotation/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.7/data/annotation/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.7/data/experiment/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.7/data/experiment/src/contrib/PACKAGES'
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'RInside' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking include directives in Makefiles ... OK
* checking compiled code ... NOTE
File 'RInside/libs/RInside.so':
  Found 'srand', possibly from 'srand' (C)
    Object: 'RInside.o'
File 'RInside/libs/RInside.so':
  Found non-API calls to R: 'R_CStackLimit', 'R_CleanTempDir',
    'R_DefParams', 'R_ReplDLLdo1', 'R_ReplDLLinit',
    'R_RunExitFinalizers', 'R_SetParams', 'R_SignalHandlers',
    'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
BUILDSTDERR: See
BUILDSTDERR:   '/builddir/build/BUILD/R-RInside-0.2.14/RInside.Rcheck/00check.log'
BUILDSTDERR: for details.
+ exit 0
Processing files: R-RInside-0.2.14-7.el7.i686
Provides: R-RInside = 0.2.14-7.el7 R-RInside(x86-32) = 0.2.14-7.el7 libRInside.so
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libR.so libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) rtld(GNU_HASH)
Processing files: R-RInside-devel-0.2.14-7.el7.i686
Provides: R-RInside-devel = 0.2.14-7.el7 R-RInside-devel(x86-32) = 0.2.14-7.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-RInside-examples-0.2.14-7.el7.i686
Provides: R-RInside-examples = 0.2.14-7.el7 R-RInside-examples(x86-32) = 0.2.14-7.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-RInside-debuginfo-0.2.14-7.el7.i686
Provides: R-RInside-debuginfo = 0.2.14-7.el7 R-RInside-debuginfo(x86-32) = 0.2.14-7.el7
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386
Wrote: /builddir/build/RPMS/R-RInside-0.2.14-7.el7.i686.rpm
Wrote: /builddir/build/RPMS/R-RInside-devel-0.2.14-7.el7.i686.rpm
Wrote: /builddir/build/RPMS/R-RInside-examples-0.2.14-7.el7.i686.rpm
Wrote: /builddir/build/RPMS/R-RInside-debuginfo-0.2.14-7.el7.i686.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.oRg6yS
+ umask 022
+ cd /builddir/build/BUILD
+ cd R-RInside-0.2.14
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-RInside-0.2.14-7.el7.i386
+ exit 0
Child return code was: 0